She uses it to change herself.

Queen Bee wanted to change herself, so she could maximize her greatest desires, the twins of power and dominance. For people to obey her, willing or not. Her beauty, her mind, her pheromones... all of this had given her those two pleasures. But as she thought to herself, 'Better to have overkill then underkill. Especially since this computer program which grants me complete control over everything could vanish so easily. Best to stack the odds in my favour.'

She used the Master PC to stop the aging of her appearance, gaining eternal youth. She also gave her shapeshifting powers after seeing the benefits from Miss Martian. She debated the idea of telepathy as well, and decided to gain it for the power it could give if she could read minds. As well as control them.

'But the most powerful control I had was when I use my pheromones to enslave people to my will. I have enhanced it so it works on all beings, male and female, human and non-human. Also allowing it to last longer and linger. Yet I can do so much better!' she thought as she used the computer to look up mind altering powers.

A hypnotic voice which can produce deeper then normal hypnosis, make people due what she wishes. It also had the power to change the beliefs of other with persuasion. A hypnotic charm to make people like her, trust her, repect her and becoming doting sycophants who would indulge her every whim. From innocent befriending to deep sexual seduction. The ability to transmit her various hypnotic powers through different objects, methods or broadcast media. Hypnotic gaze and touch, the latter not needing words. Telepathic emotional and mental controls as well as hitting emotional and pleasure centres of the brain. Then she added more mental manipulation powers.

"Add to all the mind domination, some other more physical powers. Superstrength, superspeed, invulnerability and flight. Basic superhuman superpowers. With the options for upgrades or modifications.. finished. Now just a few mods to my mind to take advantage of all the power I can.

Now that I have finished with me, what is the next step?"